Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb2Q91XX7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb2Q91XX7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb2Q91XX7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb2Q91XX7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb2Q91XX7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb2Q91XX7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb2Q91XX7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb2Q91XX7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb2Q91XX7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhgb2Q91XX7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb2Q91XX7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb2Q91XX7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb2Q91XX7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb2Q91XX7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhgb2Q91XX7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb2Q91XX7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb2Q91XX7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb2Q91XX7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Gm45364-201ENSMUST00000210883 159 ntBASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb2Q91XX7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb2Q91XX7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhgb2Q91XX7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb2Q91XX7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb2Q91XX7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb2Q91XX7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb2Q91XX7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb2Q91XX7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgb2Q91XX7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhgb2Q91XX7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb2Q91XX7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb2Q91XX7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb2Q91XX7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb2Q91XX7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb2Q91XX7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Pcdhgb2Q91XX7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb2Q91XX7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms