Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.03■□□□□ 0.48
H1fooQ8VIK3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
H1fooQ8VIK3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H1fooQ8VIK3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
H1fooQ8VIK3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H1fooQ8VIK3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Gm11175-201ENSMUST00000116172 543 ntBASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H1fooQ8VIK3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
H1fooQ8VIK3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H1fooQ8VIK3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18■□□□□ 0.47
H1fooQ8VIK3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H1fooQ8VIK3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H1fooQ8VIK3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H1fooQ8VIK3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H1fooQ8VIK3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H1fooQ8VIK3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H1fooQ8VIK3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H1fooQ8VIK3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H1fooQ8VIK3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Gm27502-201ENSMUST00000183495 199 ntBASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H1fooQ8VIK3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H1fooQ8VIK3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
H1fooQ8VIK3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
H1fooQ8VIK3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
H1fooQ8VIK3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
H1fooQ8VIK3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H1fooQ8VIK3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H1fooQ8VIK3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H1fooQ8VIK3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H1fooQ8VIK3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H1fooQ8VIK3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
H1fooQ8VIK3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H1fooQ8VIK3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms