Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cpsf4Q8BQZ5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf4Q8BQZ5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cpsf4Q8BQZ5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Cpsf4Q8BQZ5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf4Q8BQZ5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf4Q8BQZ5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf4Q8BQZ5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf4Q8BQZ5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf4Q8BQZ5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cpsf4Q8BQZ5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf4Q8BQZ5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf4Q8BQZ5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf4Q8BQZ5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf4Q8BQZ5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf4Q8BQZ5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf4Q8BQZ5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Gm10420-201ENSMUST00000121713 882 ntBASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.8■□□□□ 0.92
Cpsf4Q8BQZ5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cpsf4Q8BQZ5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf4Q8BQZ5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.77■□□□□ 0.92
Cpsf4Q8BQZ5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf4Q8BQZ5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf4Q8BQZ5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf4Q8BQZ5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf4Q8BQZ5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf4Q8BQZ5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpsf4Q8BQZ5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf4Q8BQZ5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.73■□□□□ 0.91
Cpsf4Q8BQZ5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf4Q8BQZ5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms