Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf38Q8BI21 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf38Q8BI21 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf38Q8BI21 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Rnf38Q8BI21 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf38Q8BI21 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Rnf38Q8BI21 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rnf38Q8BI21 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.79■□□□□ 0.92
Rnf38Q8BI21 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf38Q8BI21 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rnf38Q8BI21 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.79■□□□□ 0.92
Rnf38Q8BI21 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf38Q8BI21 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Rnf38Q8BI21 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf38Q8BI21 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf38Q8BI21 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf38Q8BI21 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rnf38Q8BI21 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf38Q8BI21 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf38Q8BI21 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf38Q8BI21 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rnf38Q8BI21 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.77■□□□□ 0.92
Rnf38Q8BI21 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf38Q8BI21 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf38Q8BI21 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf38Q8BI21 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf38Q8BI21 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Rnf38Q8BI21 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf38Q8BI21 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.75■□□□□ 0.91
Rnf38Q8BI21 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf38Q8BI21 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf38Q8BI21 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rnf38Q8BI21 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rnf38Q8BI21 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf38Q8BI21 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf38Q8BI21 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Rnf38Q8BI21 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Rnf38Q8BI21 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf38Q8BI21 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf38Q8BI21 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf38Q8BI21 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf38Q8BI21 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rnf38Q8BI21 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf38Q8BI21 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rnf38Q8BI21 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnf38Q8BI21 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf38Q8BI21 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.69■□□□□ 0.9
Rnf38Q8BI21 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.69■□□□□ 0.9
Rnf38Q8BI21 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf38Q8BI21 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf38Q8BI21 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf38Q8BI21 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.68■□□□□ 0.9
Rnf38Q8BI21 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf38Q8BI21 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf38Q8BI21 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf38Q8BI21 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Gm44428-201ENSMUST00000204474 874 ntBASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf38Q8BI21 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf38Q8BI21 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf38Q8BI21 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf38Q8BI21 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms