Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim62Q80V85 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim62Q80V85 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.43■■□□□ 1.18
Trim62Q80V85 Gm43566-201ENSMUST00000196851 808 ntBASIC22.43■■□□□ 1.18
Trim62Q80V85 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Trim62Q80V85 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim62Q80V85 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim62Q80V85 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim62Q80V85 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Trim62Q80V85 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim62Q80V85 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim62Q80V85 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim62Q80V85 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.42■■□□□ 1.18
Trim62Q80V85 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim62Q80V85 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim62Q80V85 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim62Q80V85 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim62Q80V85 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.41■■□□□ 1.18
Trim62Q80V85 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim62Q80V85 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim62Q80V85 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Trim62Q80V85 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim62Q80V85 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim62Q80V85 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim62Q80V85 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Trim62Q80V85 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim62Q80V85 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim62Q80V85 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim62Q80V85 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Trim62Q80V85 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim62Q80V85 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.39■■□□□ 1.17
Trim62Q80V85 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.39■■□□□ 1.17
Trim62Q80V85 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim62Q80V85 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim62Q80V85 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim62Q80V85 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.38■■□□□ 1.17
Trim62Q80V85 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim62Q80V85 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim62Q80V85 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim62Q80V85 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Trim62Q80V85 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim62Q80V85 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim62Q80V85 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim62Q80V85 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim62Q80V85 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim62Q80V85 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim62Q80V85 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trim62Q80V85 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.36■■□□□ 1.17
Trim62Q80V85 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim62Q80V85 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.36■■□□□ 1.17
Trim62Q80V85 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim62Q80V85 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Trim62Q80V85 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Trim62Q80V85 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim62Q80V85 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Trim62Q80V85 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim62Q80V85 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim62Q80V85 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim62Q80V85 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Trim62Q80V85 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim62Q80V85 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim62Q80V85 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim62Q80V85 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim62Q80V85 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Trim62Q80V85 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.32■■□□□ 1.16
Trim62Q80V85 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trim62Q80V85 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim62Q80V85 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Trim62Q80V85 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.31■■□□□ 1.16
Trim62Q80V85 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim62Q80V85 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim62Q80V85 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim62Q80V85 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim62Q80V85 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim62Q80V85 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim62Q80V85 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Gm13238-201ENSMUST00000117655 780 ntBASIC22.29■■□□□ 1.16
Trim62Q80V85 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Trim62Q80V85 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim62Q80V85 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim62Q80V85 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Trim62Q80V85 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim62Q80V85 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.28■■□□□ 1.16
Trim62Q80V85 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Trim62Q80V85 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim62Q80V85 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim62Q80V85 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms