Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox11Q7M6Y2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox11Q7M6Y2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Sox11Q7M6Y2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.93■■□□□ 1.1
Sox11Q7M6Y2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox11Q7M6Y2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox11Q7M6Y2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.92■■□□□ 1.1
Sox11Q7M6Y2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.92■■□□□ 1.1
Sox11Q7M6Y2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox11Q7M6Y2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox11Q7M6Y2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Sox11Q7M6Y2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox11Q7M6Y2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.91■■□□□ 1.1
Sox11Q7M6Y2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox11Q7M6Y2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox11Q7M6Y2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox11Q7M6Y2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox11Q7M6Y2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox11Q7M6Y2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox11Q7M6Y2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.89■■□□□ 1.09
Sox11Q7M6Y2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Sox11Q7M6Y2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Sox11Q7M6Y2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox11Q7M6Y2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Sox11Q7M6Y2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox11Q7M6Y2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox11Q7M6Y2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox11Q7M6Y2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.86■■□□□ 1.09
Sox11Q7M6Y2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.86■■□□□ 1.09
Sox11Q7M6Y2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox11Q7M6Y2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.84■■□□□ 1.09
Sox11Q7M6Y2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox11Q7M6Y2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox11Q7M6Y2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox11Q7M6Y2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox11Q7M6Y2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.83■■□□□ 1.09
Sox11Q7M6Y2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sox11Q7M6Y2 Gm12922-201ENSMUST00000120626 809 ntBASIC21.83■■□□□ 1.09
Sox11Q7M6Y2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.83■■□□□ 1.09
Sox11Q7M6Y2 Serp2-204ENSMUST00000228055 705 ntBASIC21.83■■□□□ 1.09
Sox11Q7M6Y2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.83■■□□□ 1.08
Sox11Q7M6Y2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sox11Q7M6Y2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Sox11Q7M6Y2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Sox11Q7M6Y2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox11Q7M6Y2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sox11Q7M6Y2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox11Q7M6Y2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sox11Q7M6Y2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox11Q7M6Y2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Sox11Q7M6Y2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Sox11Q7M6Y2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox11Q7M6Y2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms