Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Gm27325-201ENSMUST00000175467 74 ntBASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.75□□□□□ -0.05
Trav3-1Q5R1I8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav3-1Q5R1I8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-1Q5R1I8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-1Q5R1I8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-1Q5R1I8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-1Q5R1I8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-1Q5R1I8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trav3-1Q5R1I8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Golph3-202ENSMUST00000226517 2359 ntBASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-1Q5R1I8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-1Q5R1I8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-1Q5R1I8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-1Q5R1I8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Gm30346-201ENSMUST00000218641 1699 ntBASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-1Q5R1I8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-1Q5R1I8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-1Q5R1I8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-1Q5R1I8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-1Q5R1I8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav3-1Q5R1I8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Trav3-1Q5R1I8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trav3-1Q5R1I8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-1Q5R1I8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-1Q5R1I8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav3-1Q5R1I8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms