Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc190Q3URK1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc190Q3URK1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc190Q3URK1 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.83■□□□□ 0.61
Ccdc190Q3URK1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc190Q3URK1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc190Q3URK1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc190Q3URK1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc190Q3URK1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc190Q3URK1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc190Q3URK1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc190Q3URK1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc190Q3URK1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc190Q3URK1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc190Q3URK1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc190Q3URK1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc190Q3URK1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc190Q3URK1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc190Q3URK1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccdc190Q3URK1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc190Q3URK1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc190Q3URK1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc190Q3URK1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc190Q3URK1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ccdc190Q3URK1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc190Q3URK1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Mir3960-201ENSMUST00000198213 73 ntBASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc190Q3URK1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc190Q3URK1 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.75■□□□□ 0.59
Ccdc190Q3URK1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc190Q3URK1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc190Q3URK1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc190Q3URK1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc190Q3URK1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc190Q3URK1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc190Q3URK1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc190Q3URK1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Gm9812-201ENSMUST00000061934 968 ntBASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc190Q3URK1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms