Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.27■□□□□ 0.52
Fndc4Q3TR08 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Terc-201ENSMUST00000082862 423 ntBASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Fndc4Q3TR08 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms