Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm15039-201ENSMUST00000118914 875 ntBASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Khdc4Q3TCX3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc4Q3TCX3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc4Q3TCX3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Khdc4Q3TCX3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc4Q3TCX3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.42■□□□□ 0.86
Khdc4Q3TCX3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc4Q3TCX3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.41■□□□□ 0.86
Khdc4Q3TCX3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Gm14117-201ENSMUST00000122417 843 ntBASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc4Q3TCX3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Gm45102-201ENSMUST00000207427 857 ntBASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc4Q3TCX3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.38■□□□□ 0.85
Khdc4Q3TCX3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.38■□□□□ 0.85
Khdc4Q3TCX3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc4Q3TCX3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc4Q3TCX3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc4Q3TCX3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc4Q3TCX3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc4Q3TCX3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc4Q3TCX3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc4Q3TCX3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc4Q3TCX3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc4Q3TCX3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc4Q3TCX3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc4Q3TCX3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Gm9959-201ENSMUST00000068277 390 ntBASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Khdc4Q3TCX3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc4Q3TCX3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc4Q3TCX3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.34■□□□□ 0.85
Khdc4Q3TCX3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.34■□□□□ 0.85
Khdc4Q3TCX3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Khdc4Q3TCX3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.33■□□□□ 0.85
Khdc4Q3TCX3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Khdc4Q3TCX3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Khdc4Q3TCX3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Khdc4Q3TCX3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.32■□□□□ 0.84
Khdc4Q3TCX3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms