Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
Fen1P39749 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Fen1P39749 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fen1P39749 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.56■■□□□ 1.04
Fen1P39749 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fen1P39749 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fen1P39749 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Fen1P39749 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fen1P39749 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fen1P39749 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fen1P39749 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fen1P39749 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Fen1P39749 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fen1P39749 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fen1P39749 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Fen1P39749 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.54■■□□□ 1.04
Fen1P39749 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.54■■□□□ 1.04
Fen1P39749 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fen1P39749 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fen1P39749 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fen1P39749 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fen1P39749 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fen1P39749 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.53■■□□□ 1.04
Fen1P39749 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.52■■□□□ 1.04
Fen1P39749 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fen1P39749 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fen1P39749 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Fen1P39749 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.52■■□□□ 1.04
Fen1P39749 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Fen1P39749 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fen1P39749 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fen1P39749 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.51■■□□□ 1.03
Fen1P39749 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Fen1P39749 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.51■■□□□ 1.03
Fen1P39749 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.51■■□□□ 1.03
Fen1P39749 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fen1P39749 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fen1P39749 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Fen1P39749 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.5■■□□□ 1.03
Fen1P39749 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fen1P39749 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.49■■□□□ 1.03
Fen1P39749 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Fen1P39749 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Fen1P39749 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fen1P39749 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fen1P39749 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fen1P39749 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fen1P39749 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fen1P39749 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Fen1P39749 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Fen1P39749 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Fen1P39749 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fen1P39749 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fen1P39749 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fen1P39749 Gm9812-201ENSMUST00000061934 968 ntBASIC21.46■■□□□ 1.03
Fen1P39749 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Fen1P39749 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fen1P39749 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.45■■□□□ 1.02
Fen1P39749 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.45■■□□□ 1.02
Fen1P39749 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.45■■□□□ 1.02
Fen1P39749 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fen1P39749 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Fen1P39749 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Fen1P39749 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Fen1P39749 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fen1P39749 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fen1P39749 Mir3960-201ENSMUST00000198213 73 ntBASIC21.44■■□□□ 1.02
Fen1P39749 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Fen1P39749 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fen1P39749 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.43■■□□□ 1.02
Fen1P39749 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Fen1P39749 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fen1P39749 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fen1P39749 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fen1P39749 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.42■■□□□ 1.02
Fen1P39749 Gm11599-201ENSMUST00000118720 878 ntBASIC21.42■■□□□ 1.02
Fen1P39749 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Fen1P39749 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Fen1P39749 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fen1P39749 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fen1P39749 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Fen1P39749 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.41■■□□□ 1.02
Fen1P39749 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.41■■□□□ 1.02
Fen1P39749 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fen1P39749 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms