Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc1P07903 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc1P07903 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc1P07903 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc1P07903 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc1P07903 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc1P07903 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc1P07903 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc1P07903 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ercc1P07903 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc1P07903 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc1P07903 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.99■□□□□ 0.47
Ercc1P07903 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc1P07903 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc1P07903 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ercc1P07903 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc1P07903 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.98■□□□□ 0.47
Ercc1P07903 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc1P07903 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc1P07903 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Ercc1P07903 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.97■□□□□ 0.47
Ercc1P07903 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc1P07903 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.96■□□□□ 0.47
Ercc1P07903 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ercc1P07903 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc1P07903 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ercc1P07903 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc1P07903 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc1P07903 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.94■□□□□ 0.46
Ercc1P07903 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.94■□□□□ 0.46
Ercc1P07903 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.94■□□□□ 0.46
Ercc1P07903 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc1P07903 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
Ercc1P07903 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ercc1P07903 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Ercc1P07903 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc1P07903 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ercc1P07903 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc1P07903 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ercc1P07903 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc1P07903 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc1P07903 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc1P07903 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ercc1P07903 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc1P07903 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ercc1P07903 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Ercc1P07903 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc1P07903 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ercc1P07903 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc1P07903 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc1P07903 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc1P07903 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc1P07903 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc1P07903 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.9■□□□□ 0.46
Ercc1P07903 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.9■□□□□ 0.46
Ercc1P07903 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc1P07903 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc1P07903 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ercc1P07903 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.89■□□□□ 0.45
Ercc1P07903 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc1P07903 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc1P07903 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ercc1P07903 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.89■□□□□ 0.45
Ercc1P07903 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc1P07903 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc1P07903 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.88■□□□□ 0.45
Ercc1P07903 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.88■□□□□ 0.45
Ercc1P07903 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc1P07903 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.88■□□□□ 0.45
Ercc1P07903 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc1P07903 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc1P07903 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms