Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Becn1O88597 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Becn1O88597 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.55■■□□□ 1.52
Becn1O88597 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Becn1O88597 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Becn1O88597 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Becn1O88597 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Becn1O88597 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Becn1O88597 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Becn1O88597 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Becn1O88597 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Becn1O88597 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Becn1O88597 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.54■■□□□ 1.52
Becn1O88597 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Becn1O88597 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Becn1O88597 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.53■■□□□ 1.52
Becn1O88597 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.53■■□□□ 1.52
Becn1O88597 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Becn1O88597 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Becn1O88597 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Becn1O88597 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Becn1O88597 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Becn1O88597 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Becn1O88597 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.51■■□□□ 1.51
Becn1O88597 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Becn1O88597 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Becn1O88597 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Becn1O88597 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC24.49■■□□□ 1.51
Becn1O88597 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Becn1O88597 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Becn1O88597 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Becn1O88597 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Becn1O88597 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Becn1O88597 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.47■■□□□ 1.51
Becn1O88597 Gm7432-201ENSMUST00000210343 879 ntBASIC24.47■■□□□ 1.51
Becn1O88597 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Becn1O88597 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Becn1O88597 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Becn1O88597 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Becn1O88597 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Becn1O88597 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Becn1O88597 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Becn1O88597 Gm10616-201ENSMUST00000205285 2127 ntBASIC24.46■■□□□ 1.51
Becn1O88597 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
Becn1O88597 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
Becn1O88597 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.45■■□□□ 1.5
Becn1O88597 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
Becn1O88597 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Becn1O88597 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.45■■□□□ 1.5
Becn1O88597 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.45■■□□□ 1.5
Becn1O88597 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Becn1O88597 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Becn1O88597 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Becn1O88597 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Becn1O88597 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Becn1O88597 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Becn1O88597 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.44■■□□□ 1.5
Becn1O88597 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Becn1O88597 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.43■■□□□ 1.5
Becn1O88597 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.43■■□□□ 1.5
Becn1O88597 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Becn1O88597 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Becn1O88597 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Becn1O88597 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.43■■□□□ 1.5
Becn1O88597 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Becn1O88597 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Becn1O88597 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Becn1O88597 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Becn1O88597 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Becn1O88597 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Becn1O88597 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Becn1O88597 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Becn1O88597 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Becn1O88597 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Becn1O88597 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Becn1O88597 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.41■■□□□ 1.5
Becn1O88597 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Becn1O88597 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Becn1O88597 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Becn1O88597 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Becn1O88597 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.4■■□□□ 1.5
Becn1O88597 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Becn1O88597 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Becn1O88597 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Becn1O88597 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Becn1O88597 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Becn1O88597 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.39■■□□□ 1.49
Becn1O88597 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Becn1O88597 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Becn1O88597 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Becn1O88597 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Becn1O88597 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Becn1O88597 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms