Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SncaO55042 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SncaO55042 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.8■□□□□ 0.44
SncaO55042 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SncaO55042 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SncaO55042 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SncaO55042 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SncaO55042 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SncaO55042 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SncaO55042 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SncaO55042 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SncaO55042 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SncaO55042 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.79■□□□□ 0.44
SncaO55042 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.78■□□□□ 0.44
SncaO55042 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SncaO55042 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SncaO55042 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SncaO55042 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.78■□□□□ 0.44
SncaO55042 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SncaO55042 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SncaO55042 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SncaO55042 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SncaO55042 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SncaO55042 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.77■□□□□ 0.44
SncaO55042 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SncaO55042 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SncaO55042 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
SncaO55042 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SncaO55042 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SncaO55042 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SncaO55042 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SncaO55042 Gm22567-201ENSMUST00000175542 342 ntBASIC17.76■□□□□ 0.43
SncaO55042 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SncaO55042 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SncaO55042 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SncaO55042 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SncaO55042 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SncaO55042 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SncaO55042 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SncaO55042 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SncaO55042 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SncaO55042 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SncaO55042 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SncaO55042 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SncaO55042 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SncaO55042 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SncaO55042 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.75■□□□□ 0.43
SncaO55042 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SncaO55042 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SncaO55042 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.74■□□□□ 0.43
SncaO55042 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SncaO55042 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SncaO55042 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.74■□□□□ 0.43
SncaO55042 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SncaO55042 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SncaO55042 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SncaO55042 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SncaO55042 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SncaO55042 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.73■□□□□ 0.43
SncaO55042 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SncaO55042 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SncaO55042 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SncaO55042 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SncaO55042 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SncaO55042 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SncaO55042 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SncaO55042 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SncaO55042 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SncaO55042 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SncaO55042 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SncaO55042 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SncaO55042 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SncaO55042 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SncaO55042 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SncaO55042 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SncaO55042 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SncaO55042 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SncaO55042 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.7■□□□□ 0.42
SncaO55042 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.69■□□□□ 0.42
SncaO55042 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
SncaO55042 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SncaO55042 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SncaO55042 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SncaO55042 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SncaO55042 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SncaO55042 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SncaO55042 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SncaO55042 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SncaO55042 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SncaO55042 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SncaO55042 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.68■□□□□ 0.42
SncaO55042 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms