Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gcn1E9PVA8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Gcn1E9PVA8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Gm43017-201ENSMUST00000198296 752 ntBASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.05■□□□□ 0.64
Gcn1E9PVA8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Gm42642-201ENSMUST00000200683 355 ntBASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gcn1E9PVA8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Gm10493-201ENSMUST00000097270 612 ntBASIC19■□□□□ 0.63
Gcn1E9PVA8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19■□□□□ 0.63
Gcn1E9PVA8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gcn1E9PVA8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.99■□□□□ 0.63
Gcn1E9PVA8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gcn1E9PVA8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gcn1E9PVA8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.96■□□□□ 0.63
Gcn1E9PVA8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.62
Gcn1E9PVA8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.93■□□□□ 0.62
Gcn1E9PVA8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms