Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gcn1E9PVA8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Gcn1E9PVA8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Gm43017-201ENSMUST00000198296 752 ntBASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gcn1E9PVA8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.05■□□□□ 0.64
Gcn1E9PVA8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gcn1E9PVA8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gcn1E9PVA8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Gm42642-201ENSMUST00000200683 355 ntBASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gcn1E9PVA8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gcn1E9PVA8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gcn1E9PVA8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gcn1E9PVA8 Gm10493-201ENSMUST00000097270 612 ntBASIC19■□□□□ 0.63
Gcn1E9PVA8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19■□□□□ 0.63
Gcn1E9PVA8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gcn1E9PVA8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.99■□□□□ 0.63
Gcn1E9PVA8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gcn1E9PVA8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.97■□□□□ 0.63
Gcn1E9PVA8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gcn1E9PVA8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gcn1E9PVA8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.96■□□□□ 0.63
Gcn1E9PVA8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.62
Gcn1E9PVA8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gcn1E9PVA8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Gcn1E9PVA8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.93■□□□□ 0.62
Gcn1E9PVA8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gcn1E9PVA8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.92■□□□□ 0.62
Gcn1E9PVA8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.91■□□□□ 0.62
Gcn1E9PVA8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms