Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trbv2A0A0B4J1G8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv2A0A0B4J1G8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv2A0A0B4J1G8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv2A0A0B4J1G8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv2A0A0B4J1G8 Gm45364-201ENSMUST00000210883 159 ntBASIC19.21■□□□□ 0.67
Trbv2A0A0B4J1G8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv2A0A0B4J1G8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv2A0A0B4J1G8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trbv2A0A0B4J1G8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv2A0A0B4J1G8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Trbv2A0A0B4J1G8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Trbv2A0A0B4J1G8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv2A0A0B4J1G8 Gm8503-201ENSMUST00000118131 455 ntBASIC19.19■□□□□ 0.66
Trbv2A0A0B4J1G8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv2A0A0B4J1G8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.18■□□□□ 0.66
Trbv2A0A0B4J1G8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.17■□□□□ 0.66
Trbv2A0A0B4J1G8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv2A0A0B4J1G8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv2A0A0B4J1G8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv2A0A0B4J1G8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv2A0A0B4J1G8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv2A0A0B4J1G8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv2A0A0B4J1G8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Trbv2A0A0B4J1G8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.14■□□□□ 0.66
Trbv2A0A0B4J1G8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trbv2A0A0B4J1G8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.14■□□□□ 0.66
Trbv2A0A0B4J1G8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv2A0A0B4J1G8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trbv2A0A0B4J1G8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv2A0A0B4J1G8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv2A0A0B4J1G8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv2A0A0B4J1G8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv2A0A0B4J1G8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trbv2A0A0B4J1G8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv2A0A0B4J1G8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv2A0A0B4J1G8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv2A0A0B4J1G8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv2A0A0B4J1G8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv2A0A0B4J1G8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv2A0A0B4J1G8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv2A0A0B4J1G8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Trbv2A0A0B4J1G8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv2A0A0B4J1G8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv2A0A0B4J1G8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.08■□□□□ 0.65
Trbv2A0A0B4J1G8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv2A0A0B4J1G8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trbv2A0A0B4J1G8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trbv2A0A0B4J1G8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv2A0A0B4J1G8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv2A0A0B4J1G8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv2A0A0B4J1G8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.07■□□□□ 0.64
Trbv2A0A0B4J1G8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trbv2A0A0B4J1G8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv2A0A0B4J1G8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms