Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-6A0A075B640 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-6A0A075B640 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.02■□□□□ -0
Trav7-6A0A075B640 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-6A0A075B640 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-6A0A075B640 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7-6A0A075B640 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7-6A0A075B640 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav7-6A0A075B640 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.02□□□□□ -0.01
Trav7-6A0A075B640 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav7-6A0A075B640 Gm45364-201ENSMUST00000210883 159 ntBASIC15.01□□□□□ -0.01
Trav7-6A0A075B640 Terc-201ENSMUST00000082862 423 ntBASIC15.01□□□□□ -0.01
Trav7-6A0A075B640 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav7-6A0A075B640 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7-6A0A075B640 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-6A0A075B640 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-6A0A075B640 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-6A0A075B640 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-6A0A075B640 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7-6A0A075B640 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav7-6A0A075B640 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.96□□□□□ -0.01
Trav7-6A0A075B640 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7-6A0A075B640 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7-6A0A075B640 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7-6A0A075B640 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.96□□□□□ -0.02
Trav7-6A0A075B640 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trav7-6A0A075B640 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7-6A0A075B640 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7-6A0A075B640 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms