Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn13Q9Z0S4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn13Q9Z0S4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.38■□□□□ 0.69
Cldn13Q9Z0S4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cldn13Q9Z0S4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn13Q9Z0S4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cldn13Q9Z0S4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cldn13Q9Z0S4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn13Q9Z0S4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn13Q9Z0S4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldn13Q9Z0S4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn13Q9Z0S4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn13Q9Z0S4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn13Q9Z0S4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Cldn13Q9Z0S4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn13Q9Z0S4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cldn13Q9Z0S4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cldn13Q9Z0S4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn13Q9Z0S4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn13Q9Z0S4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cldn13Q9Z0S4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn13Q9Z0S4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn13Q9Z0S4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn13Q9Z0S4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn13Q9Z0S4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cldn13Q9Z0S4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn13Q9Z0S4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn13Q9Z0S4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn13Q9Z0S4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn13Q9Z0S4 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.31■□□□□ 0.68
Cldn13Q9Z0S4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn13Q9Z0S4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn13Q9Z0S4 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.29■□□□□ 0.68
Cldn13Q9Z0S4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn13Q9Z0S4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cldn13Q9Z0S4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 Gm10420-201ENSMUST00000121713 882 ntBASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn13Q9Z0S4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn13Q9Z0S4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn13Q9Z0S4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn13Q9Z0S4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn13Q9Z0S4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.27■□□□□ 0.68
Cldn13Q9Z0S4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn13Q9Z0S4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn13Q9Z0S4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn13Q9Z0S4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.25■□□□□ 0.67
Cldn13Q9Z0S4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cldn13Q9Z0S4 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.24■□□□□ 0.67
Cldn13Q9Z0S4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn13Q9Z0S4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn13Q9Z0S4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.24■□□□□ 0.67
Cldn13Q9Z0S4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn13Q9Z0S4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn13Q9Z0S4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn13Q9Z0S4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 213.3 ms