Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx9Q9WUH2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx9Q9WUH2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx9Q9WUH2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.82■□□□□ 0.92
Lhx9Q9WUH2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx9Q9WUH2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.82■□□□□ 0.92
Lhx9Q9WUH2 Gm45444-201ENSMUST00000211394 898 ntBASIC20.82■□□□□ 0.92
Lhx9Q9WUH2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.82■□□□□ 0.92
Lhx9Q9WUH2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lhx9Q9WUH2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx9Q9WUH2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx9Q9WUH2 Gm22567-201ENSMUST00000175542 342 ntBASIC20.79■□□□□ 0.92
Lhx9Q9WUH2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx9Q9WUH2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx9Q9WUH2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx9Q9WUH2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx9Q9WUH2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx9Q9WUH2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx9Q9WUH2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx9Q9WUH2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
Lhx9Q9WUH2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Lhx9Q9WUH2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx9Q9WUH2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.75■□□□□ 0.91
Lhx9Q9WUH2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx9Q9WUH2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lhx9Q9WUH2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx9Q9WUH2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.73■□□□□ 0.91
Lhx9Q9WUH2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx9Q9WUH2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lhx9Q9WUH2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lhx9Q9WUH2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Lhx9Q9WUH2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx9Q9WUH2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx9Q9WUH2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx9Q9WUH2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx9Q9WUH2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx9Q9WUH2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lhx9Q9WUH2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lhx9Q9WUH2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx9Q9WUH2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx9Q9WUH2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx9Q9WUH2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx9Q9WUH2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lhx9Q9WUH2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.68■□□□□ 0.9
Lhx9Q9WUH2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 200.5 ms