Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crlf1Q9JM58 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crlf1Q9JM58 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf1Q9JM58 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.69■□□□□ 0.42
Crlf1Q9JM58 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Crlf1Q9JM58 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Crlf1Q9JM58 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf1Q9JM58 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.67■□□□□ 0.42
Crlf1Q9JM58 Gm10399-202ENSMUST00000202768 748 ntBASIC17.67■□□□□ 0.42
Crlf1Q9JM58 Golgb1-201ENSMUST00000023534 498 ntBASIC17.67■□□□□ 0.42
Crlf1Q9JM58 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf1Q9JM58 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Crlf1Q9JM58 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Crlf1Q9JM58 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Crlf1Q9JM58 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Crlf1Q9JM58 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Crlf1Q9JM58 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf1Q9JM58 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.64■□□□□ 0.41
Crlf1Q9JM58 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Crlf1Q9JM58 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf1Q9JM58 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crlf1Q9JM58 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crlf1Q9JM58 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crlf1Q9JM58 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crlf1Q9JM58 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.62■□□□□ 0.41
Crlf1Q9JM58 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.62■□□□□ 0.41
Crlf1Q9JM58 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crlf1Q9JM58 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Gm29257-201ENSMUST00000186115 639 ntBASIC17.61■□□□□ 0.41
Crlf1Q9JM58 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crlf1Q9JM58 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.6■□□□□ 0.41
Crlf1Q9JM58 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
Crlf1Q9JM58 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crlf1Q9JM58 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Crlf1Q9JM58 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.58■□□□□ 0.4
Crlf1Q9JM58 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.58■□□□□ 0.4
Crlf1Q9JM58 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf1Q9JM58 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Crlf1Q9JM58 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf1Q9JM58 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.57■□□□□ 0.4
Crlf1Q9JM58 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf1Q9JM58 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf1Q9JM58 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf1Q9JM58 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf1Q9JM58 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf1Q9JM58 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms