Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rhox4bQ9JI43 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.46■□□□□ 0.39
Rhox4bQ9JI43 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rhox4bQ9JI43 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Iqck-206ENSMUST00000208658 2891 ntBASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rhox4bQ9JI43 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rhox4bQ9JI43 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rhox4bQ9JI43 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.43■□□□□ 0.38
Rhox4bQ9JI43 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rhox4bQ9JI43 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rhox4bQ9JI43 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rhox4bQ9JI43 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rhox4bQ9JI43 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rhox4bQ9JI43 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rhox4bQ9JI43 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Rhox4bQ9JI43 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rhox4bQ9JI43 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rhox4bQ9JI43 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rhox4bQ9JI43 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rhox4bQ9JI43 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.39■□□□□ 0.37
Rhox4bQ9JI43 Gm9397-201ENSMUST00000200125 605 ntBASIC17.39■□□□□ 0.37
Rhox4bQ9JI43 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rhox4bQ9JI43 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rhox4bQ9JI43 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.39■□□□□ 0.37
Rhox4bQ9JI43 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.38■□□□□ 0.37
Rhox4bQ9JI43 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rhox4bQ9JI43 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.37■□□□□ 0.37
Rhox4bQ9JI43 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rhox4bQ9JI43 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rhox4bQ9JI43 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rhox4bQ9JI43 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rhox4bQ9JI43 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Rhox4bQ9JI43 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rhox4bQ9JI43 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rhox4bQ9JI43 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.33■□□□□ 0.36
Rhox4bQ9JI43 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rhox4bQ9JI43 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms