Protein–RNA interactions for Protein: Q9D842

Aplf, Aprataxin and PNK-like factor, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AplfQ9D842 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AplfQ9D842 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
AplfQ9D842 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.42■□□□□ 0.7
AplfQ9D842 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.42■□□□□ 0.7
AplfQ9D842 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AplfQ9D842 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AplfQ9D842 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AplfQ9D842 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
AplfQ9D842 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AplfQ9D842 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AplfQ9D842 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AplfQ9D842 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.41■□□□□ 0.7
AplfQ9D842 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
AplfQ9D842 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AplfQ9D842 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.4■□□□□ 0.7
AplfQ9D842 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AplfQ9D842 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AplfQ9D842 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AplfQ9D842 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.4■□□□□ 0.7
AplfQ9D842 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.4■□□□□ 0.7
AplfQ9D842 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AplfQ9D842 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
AplfQ9D842 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.39■□□□□ 0.7
AplfQ9D842 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
AplfQ9D842 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AplfQ9D842 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AplfQ9D842 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AplfQ9D842 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AplfQ9D842 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AplfQ9D842 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AplfQ9D842 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
AplfQ9D842 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AplfQ9D842 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AplfQ9D842 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AplfQ9D842 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AplfQ9D842 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.37■□□□□ 0.69
AplfQ9D842 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AplfQ9D842 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AplfQ9D842 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AplfQ9D842 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
AplfQ9D842 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AplfQ9D842 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AplfQ9D842 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AplfQ9D842 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AplfQ9D842 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AplfQ9D842 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AplfQ9D842 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AplfQ9D842 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
AplfQ9D842 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AplfQ9D842 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
AplfQ9D842 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AplfQ9D842 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AplfQ9D842 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AplfQ9D842 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AplfQ9D842 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AplfQ9D842 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.34■□□□□ 0.69
AplfQ9D842 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.34■□□□□ 0.69
AplfQ9D842 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AplfQ9D842 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.34■□□□□ 0.69
AplfQ9D842 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
AplfQ9D842 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
AplfQ9D842 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
AplfQ9D842 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AplfQ9D842 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.33■□□□□ 0.69
AplfQ9D842 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AplfQ9D842 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AplfQ9D842 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
AplfQ9D842 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.33■□□□□ 0.68
AplfQ9D842 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.32■□□□□ 0.68
AplfQ9D842 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
AplfQ9D842 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
AplfQ9D842 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AplfQ9D842 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.31■□□□□ 0.68
AplfQ9D842 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AplfQ9D842 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AplfQ9D842 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
AplfQ9D842 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.3■□□□□ 0.68
AplfQ9D842 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AplfQ9D842 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AplfQ9D842 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.3■□□□□ 0.68
AplfQ9D842 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AplfQ9D842 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AplfQ9D842 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.29■□□□□ 0.68
AplfQ9D842 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AplfQ9D842 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AplfQ9D842 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AplfQ9D842 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AplfQ9D842 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms