Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb15Q91Y04 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.53■■□□□ 1.52
Pcdhb15Q91Y04 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb15Q91Y04 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb15Q91Y04 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb15Q91Y04 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdhb15Q91Y04 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb15Q91Y04 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb15Q91Y04 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb15Q91Y04 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Pcdhb15Q91Y04 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb15Q91Y04 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb15Q91Y04 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb15Q91Y04 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb15Q91Y04 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb15Q91Y04 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Pcdhb15Q91Y04 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb15Q91Y04 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb15Q91Y04 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb15Q91Y04 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb15Q91Y04 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.47■■□□□ 1.51
Pcdhb15Q91Y04 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb15Q91Y04 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb15Q91Y04 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb15Q91Y04 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.45■■□□□ 1.51
Pcdhb15Q91Y04 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdhb15Q91Y04 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb15Q91Y04 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb15Q91Y04 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb15Q91Y04 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb15Q91Y04 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb15Q91Y04 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb15Q91Y04 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb15Q91Y04 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb15Q91Y04 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb15Q91Y04 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb15Q91Y04 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb15Q91Y04 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Pcdhb15Q91Y04 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb15Q91Y04 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.4■■□□□ 1.5
Pcdhb15Q91Y04 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb15Q91Y04 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb15Q91Y04 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb15Q91Y04 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb15Q91Y04 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdhb15Q91Y04 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Pcdhb15Q91Y04 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb15Q91Y04 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb15Q91Y04 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Pcdhb15Q91Y04 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Pcdhb15Q91Y04 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.39■■□□□ 1.49
Pcdhb15Q91Y04 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Pcdhb15Q91Y04 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
Pcdhb15Q91Y04 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb15Q91Y04 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb15Q91Y04 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Pcdhb15Q91Y04 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Pcdhb15Q91Y04 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pcdhb15Q91Y04 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb15Q91Y04 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb15Q91Y04 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb15Q91Y04 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Pcdhb15Q91Y04 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb15Q91Y04 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb15Q91Y04 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Pcdhb15Q91Y04 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.36■■□□□ 1.49
Pcdhb15Q91Y04 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb15Q91Y04 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.35■■□□□ 1.49
Pcdhb15Q91Y04 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Pcdhb15Q91Y04 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.35■■□□□ 1.49
Pcdhb15Q91Y04 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb15Q91Y04 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb15Q91Y04 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhb15Q91Y04 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb15Q91Y04 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdhb15Q91Y04 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdhb15Q91Y04 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.33■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms