Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zcchc9Q8R1J3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Zcchc9Q8R1J3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Zcchc9Q8R1J3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Zcchc9Q8R1J3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Zcchc9Q8R1J3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Zcchc9Q8R1J3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Zcchc9Q8R1J3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Zcchc9Q8R1J3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Zcchc9Q8R1J3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Zcchc9Q8R1J3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Zcchc9Q8R1J3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Zcchc9Q8R1J3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Zcchc9Q8R1J3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.61■■□□□ 1.05
Zcchc9Q8R1J3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Zcchc9Q8R1J3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Zcchc9Q8R1J3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zcchc9Q8R1J3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zcchc9Q8R1J3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zcchc9Q8R1J3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.6■■□□□ 1.05
Zcchc9Q8R1J3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zcchc9Q8R1J3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zcchc9Q8R1J3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zcchc9Q8R1J3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zcchc9Q8R1J3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.58■■□□□ 1.05
Zcchc9Q8R1J3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zcchc9Q8R1J3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zcchc9Q8R1J3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Zcchc9Q8R1J3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.58■■□□□ 1.05
Zcchc9Q8R1J3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zcchc9Q8R1J3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Zcchc9Q8R1J3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Zcchc9Q8R1J3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zcchc9Q8R1J3 Etf1-202ENSMUST00000180351 108 ntBASIC21.57■■□□□ 1.04
Zcchc9Q8R1J3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zcchc9Q8R1J3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Zcchc9Q8R1J3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zcchc9Q8R1J3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zcchc9Q8R1J3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zcchc9Q8R1J3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zcchc9Q8R1J3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zcchc9Q8R1J3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Zcchc9Q8R1J3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zcchc9Q8R1J3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zcchc9Q8R1J3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Zcchc9Q8R1J3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Zcchc9Q8R1J3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.53■■□□□ 1.04
Zcchc9Q8R1J3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Zcchc9Q8R1J3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Zcchc9Q8R1J3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Zcchc9Q8R1J3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Zcchc9Q8R1J3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zcchc9Q8R1J3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zcchc9Q8R1J3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zcchc9Q8R1J3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms