Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ddx54Q8K4L0 Gm18284-201ENSMUST00000172604 624 ntBASIC29.2■■■□□ 2.26
Ddx54Q8K4L0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Ddx54Q8K4L0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ddx54Q8K4L0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ddx54Q8K4L0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ddx54Q8K4L0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC29.19■■■□□ 2.26
Ddx54Q8K4L0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC29.19■■■□□ 2.26
Ddx54Q8K4L0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx54Q8K4L0 Gm29257-201ENSMUST00000186115 639 ntBASIC29.19■■■□□ 2.26
Ddx54Q8K4L0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx54Q8K4L0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx54Q8K4L0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx54Q8K4L0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ddx54Q8K4L0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ddx54Q8K4L0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Ddx54Q8K4L0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ddx54Q8K4L0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC29.17■■■□□ 2.26
Ddx54Q8K4L0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ddx54Q8K4L0 Golgb1-201ENSMUST00000023534 498 ntBASIC29.16■■■□□ 2.26
Ddx54Q8K4L0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ddx54Q8K4L0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ddx54Q8K4L0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ddx54Q8K4L0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC29.15■■■□□ 2.26
Ddx54Q8K4L0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ddx54Q8K4L0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ddx54Q8K4L0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Ddx54Q8K4L0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ddx54Q8K4L0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Ddx54Q8K4L0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ddx54Q8K4L0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ddx54Q8K4L0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC29.13■■■□□ 2.25
Ddx54Q8K4L0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ddx54Q8K4L0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ddx54Q8K4L0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Ddx54Q8K4L0 Gm10399-202ENSMUST00000202768 748 ntBASIC29.12■■■□□ 2.25
Ddx54Q8K4L0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ddx54Q8K4L0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Ddx54Q8K4L0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ddx54Q8K4L0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC29.11■■■□□ 2.25
Ddx54Q8K4L0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC29.11■■■□□ 2.25
Ddx54Q8K4L0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC29.11■■■□□ 2.25
Ddx54Q8K4L0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ddx54Q8K4L0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.1■■■□□ 2.25
Ddx54Q8K4L0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ddx54Q8K4L0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx54Q8K4L0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC29.08■■■□□ 2.25
Ddx54Q8K4L0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Ddx54Q8K4L0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Ddx54Q8K4L0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC29.07■■■□□ 2.24
Ddx54Q8K4L0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC29.07■■■□□ 2.24
Ddx54Q8K4L0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ddx54Q8K4L0 Amer2-203ENSMUST00000225247 2662 ntBASIC29.07■■■□□ 2.24
Ddx54Q8K4L0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC29.06■■■□□ 2.24
Ddx54Q8K4L0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
Ddx54Q8K4L0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx54Q8K4L0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx54Q8K4L0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
Ddx54Q8K4L0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ddx54Q8K4L0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ddx54Q8K4L0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ddx54Q8K4L0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ddx54Q8K4L0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ddx54Q8K4L0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ddx54Q8K4L0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC29.04■■■□□ 2.24
Ddx54Q8K4L0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC29.04■■■□□ 2.24
Ddx54Q8K4L0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Ddx54Q8K4L0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 Gm11847-201ENSMUST00000125165 1119 ntBASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ddx54Q8K4L0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx54Q8K4L0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC29.01■■■□□ 2.23
Ddx54Q8K4L0 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.01■■■□□ 2.23
Ddx54Q8K4L0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ddx54Q8K4L0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ddx54Q8K4L0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC29■■■□□ 2.23
Ddx54Q8K4L0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms