Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf4Q8K4J2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf4Q8K4J2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf4Q8K4J2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf4Q8K4J2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf4Q8K4J2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf4Q8K4J2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf4Q8K4J2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ebf4Q8K4J2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf4Q8K4J2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
Ebf4Q8K4J2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ebf4Q8K4J2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ebf4Q8K4J2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ebf4Q8K4J2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf4Q8K4J2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf4Q8K4J2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf4Q8K4J2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf4Q8K4J2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf4Q8K4J2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf4Q8K4J2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf4Q8K4J2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Ebf4Q8K4J2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf4Q8K4J2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ebf4Q8K4J2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf4Q8K4J2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Ebf4Q8K4J2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf4Q8K4J2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ebf4Q8K4J2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf4Q8K4J2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ebf4Q8K4J2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf4Q8K4J2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.77■□□□□ 0.76
Ebf4Q8K4J2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf4Q8K4J2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf4Q8K4J2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf4Q8K4J2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.77■□□□□ 0.76
Ebf4Q8K4J2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf4Q8K4J2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf4Q8K4J2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf4Q8K4J2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.75■□□□□ 0.75
Ebf4Q8K4J2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf4Q8K4J2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.75■□□□□ 0.75
Ebf4Q8K4J2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ebf4Q8K4J2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf4Q8K4J2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf4Q8K4J2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ebf4Q8K4J2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf4Q8K4J2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf4Q8K4J2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ebf4Q8K4J2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf4Q8K4J2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
Ebf4Q8K4J2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf4Q8K4J2 Gm22567-201ENSMUST00000175542 342 ntBASIC19.73■□□□□ 0.75
Ebf4Q8K4J2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf4Q8K4J2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Ebf4Q8K4J2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ebf4Q8K4J2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.71■□□□□ 0.75
Ebf4Q8K4J2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms