Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.96■□□□□ 0.95
Rnf38Q8BI21 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf38Q8BI21 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rnf38Q8BI21 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf38Q8BI21 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Rnf38Q8BI21 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf38Q8BI21 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf38Q8BI21 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf38Q8BI21 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf38Q8BI21 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf38Q8BI21 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf38Q8BI21 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.93■□□□□ 0.94
Rnf38Q8BI21 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.93■□□□□ 0.94
Rnf38Q8BI21 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf38Q8BI21 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf38Q8BI21 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf38Q8BI21 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.92■□□□□ 0.94
Rnf38Q8BI21 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf38Q8BI21 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.92■□□□□ 0.94
Rnf38Q8BI21 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf38Q8BI21 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf38Q8BI21 Gm22567-201ENSMUST00000175542 342 ntBASIC20.91■□□□□ 0.94
Rnf38Q8BI21 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.91■□□□□ 0.94
Rnf38Q8BI21 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.91■□□□□ 0.94
Rnf38Q8BI21 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf38Q8BI21 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.9■□□□□ 0.94
Rnf38Q8BI21 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf38Q8BI21 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.89■□□□□ 0.93
Rnf38Q8BI21 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf38Q8BI21 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf38Q8BI21 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rnf38Q8BI21 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf38Q8BI21 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf38Q8BI21 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rnf38Q8BI21 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rnf38Q8BI21 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf38Q8BI21 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf38Q8BI21 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf38Q8BI21 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf38Q8BI21 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rnf38Q8BI21 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.84■□□□□ 0.93
Rnf38Q8BI21 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf38Q8BI21 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf38Q8BI21 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
Rnf38Q8BI21 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf38Q8BI21 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf38Q8BI21 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf38Q8BI21 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf38Q8BI21 Gm6311-201ENSMUST00000073790 878 ntBASIC20.83■□□□□ 0.93
Rnf38Q8BI21 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf38Q8BI21 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf38Q8BI21 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf38Q8BI21 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf38Q8BI21 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf38Q8BI21 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms