Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Prpf40bQ80W14 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Prpf40bQ80W14 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Prpf40bQ80W14 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Prpf40bQ80W14 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.07■■□□□ 1.6
Prpf40bQ80W14 Gm13241-201ENSMUST00000094493 780 ntBASIC25.07■■□□□ 1.6
Prpf40bQ80W14 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Prpf40bQ80W14 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Prpf40bQ80W14 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.06■■□□□ 1.6
Prpf40bQ80W14 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Prpf40bQ80W14 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.06■■□□□ 1.6
Prpf40bQ80W14 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Prpf40bQ80W14 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Prpf40bQ80W14 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.06■■□□□ 1.6
Prpf40bQ80W14 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Prpf40bQ80W14 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.05■■□□□ 1.6
Prpf40bQ80W14 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.05■■□□□ 1.6
Prpf40bQ80W14 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.05■■□□□ 1.6
Prpf40bQ80W14 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Prpf40bQ80W14 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.05■■□□□ 1.6
Prpf40bQ80W14 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Prpf40bQ80W14 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Prpf40bQ80W14 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Prpf40bQ80W14 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Prpf40bQ80W14 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Prpf40bQ80W14 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.03■■□□□ 1.6
Prpf40bQ80W14 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.02■■□□□ 1.6
Prpf40bQ80W14 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Prpf40bQ80W14 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Prpf40bQ80W14 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.01■■□□□ 1.59
Prpf40bQ80W14 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Prpf40bQ80W14 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Prpf40bQ80W14 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Prpf40bQ80W14 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25■■□□□ 1.59
Prpf40bQ80W14 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25■■□□□ 1.59
Prpf40bQ80W14 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25■■□□□ 1.59
Prpf40bQ80W14 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Prpf40bQ80W14 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Prpf40bQ80W14 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Prpf40bQ80W14 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.98■■□□□ 1.59
Prpf40bQ80W14 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Prpf40bQ80W14 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.97■■□□□ 1.59
Prpf40bQ80W14 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.97■■□□□ 1.59
Prpf40bQ80W14 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Prpf40bQ80W14 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Prpf40bQ80W14 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Prpf40bQ80W14 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Prpf40bQ80W14 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Prpf40bQ80W14 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Prpf40bQ80W14 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
Prpf40bQ80W14 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Prpf40bQ80W14 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
Prpf40bQ80W14 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Prpf40bQ80W14 Gm7417-201ENSMUST00000192950 473 ntBASIC24.94■■□□□ 1.58
Prpf40bQ80W14 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Prpf40bQ80W14 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Prpf40bQ80W14 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Prpf40bQ80W14 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Prpf40bQ80W14 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Prpf40bQ80W14 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.92■■□□□ 1.58
Prpf40bQ80W14 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Prpf40bQ80W14 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.92■■□□□ 1.58
Prpf40bQ80W14 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Prpf40bQ80W14 Gm21956-201ENSMUST00000179946 522 ntBASIC24.91■■□□□ 1.58
Prpf40bQ80W14 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Prpf40bQ80W14 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Prpf40bQ80W14 Gm9847-201ENSMUST00000052528 599 ntBASIC24.91■■□□□ 1.58
Prpf40bQ80W14 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Prpf40bQ80W14 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.9■■□□□ 1.58
Prpf40bQ80W14 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Prpf40bQ80W14 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
Prpf40bQ80W14 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Prpf40bQ80W14 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Prpf40bQ80W14 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Prpf40bQ80W14 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Prpf40bQ80W14 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Prpf40bQ80W14 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.89■■□□□ 1.58
Prpf40bQ80W14 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Prpf40bQ80W14 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms