Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clns1aQ61189 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.53■□□□□ 0.56
Clns1aQ61189 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clns1aQ61189 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clns1aQ61189 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clns1aQ61189 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clns1aQ61189 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clns1aQ61189 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clns1aQ61189 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clns1aQ61189 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clns1aQ61189 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clns1aQ61189 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Clns1aQ61189 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Clns1aQ61189 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clns1aQ61189 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clns1aQ61189 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clns1aQ61189 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clns1aQ61189 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clns1aQ61189 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clns1aQ61189 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.51■□□□□ 0.55
Clns1aQ61189 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clns1aQ61189 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Clns1aQ61189 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clns1aQ61189 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Clns1aQ61189 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clns1aQ61189 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clns1aQ61189 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clns1aQ61189 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clns1aQ61189 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clns1aQ61189 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clns1aQ61189 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.49■□□□□ 0.55
Clns1aQ61189 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.49■□□□□ 0.55
Clns1aQ61189 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.49■□□□□ 0.55
Clns1aQ61189 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clns1aQ61189 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clns1aQ61189 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clns1aQ61189 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clns1aQ61189 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.48■□□□□ 0.55
Clns1aQ61189 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clns1aQ61189 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clns1aQ61189 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.47■□□□□ 0.55
Clns1aQ61189 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clns1aQ61189 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clns1aQ61189 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.47■□□□□ 0.55
Clns1aQ61189 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.47■□□□□ 0.55
Clns1aQ61189 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Clns1aQ61189 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clns1aQ61189 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clns1aQ61189 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clns1aQ61189 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clns1aQ61189 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clns1aQ61189 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.46■□□□□ 0.55
Clns1aQ61189 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Clns1aQ61189 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Clns1aQ61189 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clns1aQ61189 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Clns1aQ61189 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clns1aQ61189 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clns1aQ61189 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clns1aQ61189 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Clns1aQ61189 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clns1aQ61189 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clns1aQ61189 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clns1aQ61189 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clns1aQ61189 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clns1aQ61189 Nkain2-201ENSMUST00000092602 558 ntBASIC18.42■□□□□ 0.54
Clns1aQ61189 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.42■□□□□ 0.54
Clns1aQ61189 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clns1aQ61189 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clns1aQ61189 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clns1aQ61189 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Clns1aQ61189 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.41■□□□□ 0.54
Clns1aQ61189 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clns1aQ61189 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clns1aQ61189 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clns1aQ61189 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clns1aQ61189 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clns1aQ61189 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Clns1aQ61189 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clns1aQ61189 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clns1aQ61189 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clns1aQ61189 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clns1aQ61189 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clns1aQ61189 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clns1aQ61189 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clns1aQ61189 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.39■□□□□ 0.54
Clns1aQ61189 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clns1aQ61189 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms