Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx6-3Q3UHX8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.7■□□□□ 0.9
Nkx6-3Q3UHX8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx6-3Q3UHX8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx6-3Q3UHX8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx6-3Q3UHX8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx6-3Q3UHX8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx6-3Q3UHX8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx6-3Q3UHX8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx6-3Q3UHX8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx6-3Q3UHX8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nkx6-3Q3UHX8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx6-3Q3UHX8 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.63■□□□□ 0.89
Nkx6-3Q3UHX8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx6-3Q3UHX8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx6-3Q3UHX8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.62■□□□□ 0.89
Nkx6-3Q3UHX8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.62■□□□□ 0.89
Nkx6-3Q3UHX8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx6-3Q3UHX8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx6-3Q3UHX8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx6-3Q3UHX8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx6-3Q3UHX8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nkx6-3Q3UHX8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-3Q3UHX8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx6-3Q3UHX8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx6-3Q3UHX8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx6-3Q3UHX8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx6-3Q3UHX8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx6-3Q3UHX8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx6-3Q3UHX8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms