Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Carmil3Q3UFQ8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Carmil3Q3UFQ8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
Carmil3Q3UFQ8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Carmil3Q3UFQ8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Carmil3Q3UFQ8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Carmil3Q3UFQ8 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.58■■□□□ 1.84
Carmil3Q3UFQ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Carmil3Q3UFQ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Carmil3Q3UFQ8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Carmil3Q3UFQ8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Carmil3Q3UFQ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Carmil3Q3UFQ8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Carmil3Q3UFQ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
Carmil3Q3UFQ8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.56■■□□□ 1.84
Carmil3Q3UFQ8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.55■■□□□ 1.84
Carmil3Q3UFQ8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Carmil3Q3UFQ8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Carmil3Q3UFQ8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.54■■□□□ 1.84
Carmil3Q3UFQ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Carmil3Q3UFQ8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Carmil3Q3UFQ8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Carmil3Q3UFQ8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Carmil3Q3UFQ8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.52■■□□□ 1.84
Carmil3Q3UFQ8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.52■■□□□ 1.84
Carmil3Q3UFQ8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.52■■□□□ 1.84
Carmil3Q3UFQ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Carmil3Q3UFQ8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.51■■□□□ 1.83
Carmil3Q3UFQ8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Carmil3Q3UFQ8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Carmil3Q3UFQ8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Carmil3Q3UFQ8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Carmil3Q3UFQ8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Carmil3Q3UFQ8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Carmil3Q3UFQ8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Carmil3Q3UFQ8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Carmil3Q3UFQ8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Carmil3Q3UFQ8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Carmil3Q3UFQ8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Carmil3Q3UFQ8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Carmil3Q3UFQ8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Carmil3Q3UFQ8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Carmil3Q3UFQ8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Carmil3Q3UFQ8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Carmil3Q3UFQ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.46■■□□□ 1.83
Carmil3Q3UFQ8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Carmil3Q3UFQ8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Carmil3Q3UFQ8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Carmil3Q3UFQ8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Carmil3Q3UFQ8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
Carmil3Q3UFQ8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Carmil3Q3UFQ8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Carmil3Q3UFQ8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.44■■□□□ 1.82
Carmil3Q3UFQ8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Carmil3Q3UFQ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Carmil3Q3UFQ8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Carmil3Q3UFQ8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Carmil3Q3UFQ8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.43■■□□□ 1.82
Carmil3Q3UFQ8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Carmil3Q3UFQ8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Carmil3Q3UFQ8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Carmil3Q3UFQ8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Carmil3Q3UFQ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.42■■□□□ 1.82
Carmil3Q3UFQ8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Carmil3Q3UFQ8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Carmil3Q3UFQ8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Carmil3Q3UFQ8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Carmil3Q3UFQ8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Carmil3Q3UFQ8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Carmil3Q3UFQ8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Carmil3Q3UFQ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.39■■□□□ 1.82
Carmil3Q3UFQ8 Gm7417-201ENSMUST00000192950 473 ntBASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms