Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nell1Q2VWQ2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Nell1Q2VWQ2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nell1Q2VWQ2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Nell1Q2VWQ2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nell1Q2VWQ2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Nell1Q2VWQ2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nell1Q2VWQ2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nell1Q2VWQ2 Gm13241-201ENSMUST00000094493 780 ntBASIC21.25■□□□□ 0.99
Nell1Q2VWQ2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nell1Q2VWQ2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nell1Q2VWQ2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nell1Q2VWQ2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nell1Q2VWQ2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nell1Q2VWQ2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nell1Q2VWQ2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nell1Q2VWQ2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nell1Q2VWQ2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 Serp2-204ENSMUST00000228055 705 ntBASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nell1Q2VWQ2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.2■□□□□ 0.98
Nell1Q2VWQ2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nell1Q2VWQ2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nell1Q2VWQ2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
Nell1Q2VWQ2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nell1Q2VWQ2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nell1Q2VWQ2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nell1Q2VWQ2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nell1Q2VWQ2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nell1Q2VWQ2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nell1Q2VWQ2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nell1Q2VWQ2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nell1Q2VWQ2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Nell1Q2VWQ2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.17■□□□□ 0.98
Nell1Q2VWQ2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.17■□□□□ 0.98
Nell1Q2VWQ2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nell1Q2VWQ2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nell1Q2VWQ2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nell1Q2VWQ2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nell1Q2VWQ2 Gm7417-201ENSMUST00000192950 473 ntBASIC21.16■□□□□ 0.98
Nell1Q2VWQ2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nell1Q2VWQ2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.16■□□□□ 0.98
Nell1Q2VWQ2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nell1Q2VWQ2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nell1Q2VWQ2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nell1Q2VWQ2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nell1Q2VWQ2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nell1Q2VWQ2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.14■□□□□ 0.97
Nell1Q2VWQ2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nell1Q2VWQ2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nell1Q2VWQ2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nell1Q2VWQ2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nell1Q2VWQ2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nell1Q2VWQ2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nell1Q2VWQ2 Gm9847-201ENSMUST00000052528 599 ntBASIC21.11■□□□□ 0.97
Nell1Q2VWQ2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nell1Q2VWQ2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms