Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgb1P63158 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgb1P63158 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgb1P63158 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgb1P63158 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Hmgb1P63158 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.88■■□□□ 1.41
Hmgb1P63158 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hmgb1P63158 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.88■■□□□ 1.41
Hmgb1P63158 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
Hmgb1P63158 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgb1P63158 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgb1P63158 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.87■■□□□ 1.41
Hmgb1P63158 Gm9806-201ENSMUST00000051080 552 ntBASIC23.87■■□□□ 1.41
Hmgb1P63158 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgb1P63158 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgb1P63158 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Hmgb1P63158 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Hmgb1P63158 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Hmgb1P63158 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.86■■□□□ 1.41
Hmgb1P63158 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hmgb1P63158 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Hmgb1P63158 Scarna2-201ENSMUST00000157560 414 ntBASIC23.85■■□□□ 1.41
Hmgb1P63158 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Hmgb1P63158 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hmgb1P63158 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgb1P63158 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hmgb1P63158 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.83■■□□□ 1.41
Hmgb1P63158 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hmgb1P63158 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgb1P63158 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgb1P63158 Gm16437-201ENSMUST00000025669 507 ntBASIC23.82■■□□□ 1.4
Hmgb1P63158 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgb1P63158 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgb1P63158 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgb1P63158 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgb1P63158 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgb1P63158 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.81■■□□□ 1.4
Hmgb1P63158 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.81■■□□□ 1.4
Hmgb1P63158 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.8■■□□□ 1.4
Hmgb1P63158 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.8■■□□□ 1.4
Hmgb1P63158 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgb1P63158 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.8■■□□□ 1.4
Hmgb1P63158 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgb1P63158 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgb1P63158 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.79■■□□□ 1.4
Hmgb1P63158 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgb1P63158 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Hmgb1P63158 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgb1P63158 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgb1P63158 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgb1P63158 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgb1P63158 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.78■■□□□ 1.4
Hmgb1P63158 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgb1P63158 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgb1P63158 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgb1P63158 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Hmgb1P63158 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Hmgb1P63158 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Gm11687-201ENSMUST00000118911 886 ntBASIC23.77■■□□□ 1.4
Hmgb1P63158 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Hmgb1P63158 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.77■■□□□ 1.4
Hmgb1P63158 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgb1P63158 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.76■■□□□ 1.39
Hmgb1P63158 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.76■■□□□ 1.39
Hmgb1P63158 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgb1P63158 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgb1P63158 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgb1P63158 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgb1P63158 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Hmgb1P63158 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgb1P63158 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.75■■□□□ 1.39
Hmgb1P63158 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Hmgb1P63158 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Hmgb1P63158 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgb1P63158 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.75■■□□□ 1.39
Hmgb1P63158 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgb1P63158 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgb1P63158 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hmgb1P63158 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Hmgb1P63158 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hmgb1P63158 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hmgb1P63158 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgb1P63158 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgb1P63158 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgb1P63158 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgb1P63158 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Hmgb1P63158 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms