Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 YPL062WYPL062W 405 nt9.12□□□□□ -0.95
TY1B-PR3P0C2J1 GUD1YDL238C 1470 nt9.12□□□□□ -0.95
TY1B-PR3P0C2J1 SLA2YNL243W 2907 nt9.12□□□□□ -0.95
TY1B-PR3P0C2J1 AMD1YML035C 2433 nt9.12□□□□□ -0.95
TY1B-PR3P0C2J1 MCH2YKL221W 1422 nt9.12□□□□□ -0.95
TY1B-PR3P0C2J1 GIT1YCR098C 1557 nt9.11□□□□□ -0.95
TY1B-PR3P0C2J1 YGR182CYGR182C 354 nt9.11□□□□□ -0.95
TY1B-PR3P0C2J1 PAN6YIL145C 930 nt9.11□□□□□ -0.95
TY1B-PR3P0C2J1 TAH11YJR046W 1815 nt9.1□□□□□ -0.95
TY1B-PR3P0C2J1 MTC1YJL123C 1437 nt9.1□□□□□ -0.95
TY1B-PR3P0C2J1 AIM34YMR003W 597 nt9.09□□□□□ -0.95
TY1B-PR3P0C2J1 RPL5YPL131W 894 nt9.09□□□□□ -0.95
TY1B-PR3P0C2J1 YCL041CYCL041C 495 nt9.09□□□□□ -0.95
TY1B-PR3P0C2J1 ORC5YNL261W 1440 nt9.09□□□□□ -0.95
TY1B-PR3P0C2J1 YDR109CYDR109C 2148 nt9.09□□□□□ -0.96
TY1B-PR3P0C2J1 BDF2YDL070W 1917 nt9.08□□□□□ -0.96
TY1B-PR3P0C2J1 LEU5YHR002W 1074 nt9.08□□□□□ -0.96
TY1B-PR3P0C2J1 GSH1YJL101C 2037 nt9.08□□□□□ -0.96
TY1B-PR3P0C2J1 YEL053W-AYEL053W-A 348 nt9.07□□□□□ -0.96
TY1B-PR3P0C2J1 THI2YBR240C 1353 nt9.07□□□□□ -0.96
TY1B-PR3P0C2J1 YNR042WYNR042W 429 nt9.07□□□□□ -0.96
TY1B-PR3P0C2J1 YCR097W-AYCR097W-A 267 nt9.06□□□□□ -0.96
TY1B-PR3P0C2J1 GPH1YPR160W 2709 nt9.06□□□□□ -0.96
TY1B-PR3P0C2J1 YHR070C-AYHR070C-A 411 nt9.05□□□□□ -0.96
TY1B-PR3P0C2J1 CYB2YML054C 1776 nt9.05□□□□□ -0.96
TY1B-PR3P0C2J1 QCR8YJL166W 285 nt9.04□□□□□ -0.96
TY1B-PR3P0C2J1 RTG2YGL252C 1767 nt9.04□□□□□ -0.96
TY1B-PR3P0C2J1 XBP1YIL101C 1944 nt9.03□□□□□ -0.96
TY1B-PR3P0C2J1 GTT3YEL017W 1014 nt9.03□□□□□ -0.96
TY1B-PR3P0C2J1 BBP1YPL255W 1158 nt9.02□□□□□ -0.97
TY1B-PR3P0C2J1 PRO3YER023W 861 nt9.01□□□□□ -0.97
TY1B-PR3P0C2J1 DJP1YIR004W 1299 nt9.01□□□□□ -0.97
TY1B-PR3P0C2J1 YGL194C-AYGL194C-A 243 nt9.01□□□□□ -0.97
TY1B-PR3P0C2J1 SHM1YBR263W 1473 nt9□□□□□ -0.97
TY1B-PR3P0C2J1 YGR176WYGR176W 348 nt9□□□□□ -0.97
TY1B-PR3P0C2J1 QNS1YHR074W 2145 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 YCR075W-AYCR075W-A 228 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 YDL034WYDL034W 345 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 OPI8YKR035C 642 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 DPH5YLR172C 903 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 BNA3YJL060W 1335 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 PAC10YGR078C 600 nt8.99□□□□□ -0.97
TY1B-PR3P0C2J1 PMT3YOR321W 2262 nt8.98□□□□□ -0.97
TY1B-PR3P0C2J1 HSX1tR(CCU)J 72 nt8.98□□□□□ -0.97
TY1B-PR3P0C2J1 PGU1YJR153W 1086 nt8.98□□□□□ -0.97
TY1B-PR3P0C2J1 ATP14YLR295C 375 nt8.97□□□□□ -0.97
TY1B-PR3P0C2J1 YHM2YMR241W 945 nt8.97□□□□□ -0.97
TY1B-PR3P0C2J1 VPS61YDR136C 573 nt8.96□□□□□ -0.97
TY1B-PR3P0C2J1 ATO3YDR384C 828 nt8.96□□□□□ -0.97
TY1B-PR3P0C2J1 CSG2YBR036C 1233 nt8.96□□□□□ -0.97
TY1B-PR3P0C2J1 YMC1YPR058W 924 nt8.96□□□□□ -0.97
TY1B-PR3P0C2J1 KKQ8YKL168C 2175 nt8.96□□□□□ -0.98
TY1B-PR3P0C2J1 SLO1YER180C-A 258 nt8.96□□□□□ -0.98
TY1B-PR3P0C2J1 PGM1YKL127W 1713 nt8.96□□□□□ -0.98
TY1B-PR3P0C2J1 IPI1YHR085W 1005 nt8.95□□□□□ -0.98
TY1B-PR3P0C2J1 PRM10YJL108C 1152 nt8.95□□□□□ -0.98
TY1B-PR3P0C2J1 YAP1801YHR161C 1914 nt8.94□□□□□ -0.98
TY1B-PR3P0C2J1 DAL82YNL314W 768 nt8.94□□□□□ -0.98
TY1B-PR3P0C2J1 ITR1YDR497C 1755 nt8.94□□□□□ -0.98
TY1B-PR3P0C2J1 YDR154CYDR154C 351 nt8.94□□□□□ -0.98
TY1B-PR3P0C2J1 YKL151CYKL151C 1014 nt8.94□□□□□ -0.98
TY1B-PR3P0C2J1 YBR144CYBR144C 315 nt8.94□□□□□ -0.98
TY1B-PR3P0C2J1 ALR1YOL130W 2580 nt8.93□□□□□ -0.98
TY1B-PR3P0C2J1 GAT3YLR013W 426 nt8.93□□□□□ -0.98
TY1B-PR3P0C2J1 YBR124WYBR124W 360 nt8.93□□□□□ -0.98
TY1B-PR3P0C2J1 GIR2YDR152W 798 nt8.92□□□□□ -0.98
TY1B-PR3P0C2J1 CAD1YDR423C 1230 nt8.92□□□□□ -0.98
TY1B-PR3P0C2J1 YMR253CYMR253C 1245 nt8.92□□□□□ -0.98
TY1B-PR3P0C2J1 TIM54YJL054W 1437 nt8.92□□□□□ -0.98
TY1B-PR3P0C2J1 RTT106YNL206C 1368 nt8.92□□□□□ -0.98
TY1B-PR3P0C2J1 NOB1YOR056C 1380 nt8.92□□□□□ -0.98
TY1B-PR3P0C2J1 YCL065WYCL065W 369 nt8.91□□□□□ -0.98
TY1B-PR3P0C2J1 APS3YJL024C 585 nt8.91□□□□□ -0.98
TY1B-PR3P0C2J1 NDC1YML031W 1968 nt8.91□□□□□ -0.98
TY1B-PR3P0C2J1 NTG1YAL015C 1200 nt8.91□□□□□ -0.98
TY1B-PR3P0C2J1 YJR115WYJR115W 510 nt8.89□□□□□ -0.99
TY1B-PR3P0C2J1 YLL059CYLL059C 507 nt8.89□□□□□ -0.99
TY1B-PR3P0C2J1 COX9YDL067C 180 nt8.89□□□□□ -0.99
TY1B-PR3P0C2J1 CWC21YDR482C 408 nt8.89□□□□□ -0.99
TY1B-PR3P0C2J1 ECM15YBL001C 315 nt8.89□□□□□ -0.99
TY1B-PR3P0C2J1 SAM4YPL273W 978 nt8.89□□□□□ -0.99
TY1B-PR3P0C2J1 AGP2YBR132C 1791 nt8.88□□□□□ -0.99
TY1B-PR3P0C2J1 RPT6YGL048C 1218 nt8.88□□□□□ -0.99
TY1B-PR3P0C2J1 SUF5tG(CCC)O 72 nt8.87□□□□□ -0.99
TY1B-PR3P0C2J1 CIS3YJL158C 684 nt8.86□□□□□ -0.99
TY1B-PR3P0C2J1 ECM27YJR106W 2178 nt8.85□□□□□ -0.99
TY1B-PR3P0C2J1 UTR4YEL038W 684 nt8.85□□□□□ -0.99
TY1B-PR3P0C2J1 YLR173WYLR173W 1827 nt8.85□□□□□ -0.99
TY1B-PR3P0C2J1 VRP1YLR337C 2454 nt8.84□□□□□ -0.99
TY1B-PR3P0C2J1 GYP8YFL027C 1494 nt8.84□□□□□ -1
TY1B-PR3P0C2J1 YHR127WYHR127W 732 nt8.83□□□□□ -1
TY1B-PR3P0C2J1 HIS7YBR248C 1659 nt8.82□□□□□ -1
TY1B-PR3P0C2J1 EFM1YHL039W 1758 nt8.82□□□□□ -1
TY1B-PR3P0C2J1 YHC3YJL059W 1227 nt8.82□□□□□ -1
TY1B-PR3P0C2J1 YOR318CYOR318C 306 nt8.82□□□□□ -1
TY1B-PR3P0C2J1 tN(GUU)CtN(GUU)C 74 nt8.81□□□□□ -1
TY1B-PR3P0C2J1 tN(GUU)FtN(GUU)F 74 nt8.81□□□□□ -1
TY1B-PR3P0C2J1 tN(GUU)GtN(GUU)G 74 nt8.81□□□□□ -1
TY1B-PR3P0C2J1 tN(GUU)KtN(GUU)K 74 nt8.81□□□□□ -1
TY1B-PR3P0C2J1 tN(GUU)LtN(GUU)L 74 nt8.81□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 82.2 ms