Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tgfb1P04202 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tgfb1P04202 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfb1P04202 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.17■□□□□ 0.82
Tgfb1P04202 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.17■□□□□ 0.82
Tgfb1P04202 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfb1P04202 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfb1P04202 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.16■□□□□ 0.82
Tgfb1P04202 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfb1P04202 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfb1P04202 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.16■□□□□ 0.82
Tgfb1P04202 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tgfb1P04202 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.15■□□□□ 0.82
Tgfb1P04202 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfb1P04202 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfb1P04202 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.15■□□□□ 0.82
Tgfb1P04202 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfb1P04202 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfb1P04202 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Tgfb1P04202 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.15■□□□□ 0.82
Tgfb1P04202 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.14■□□□□ 0.82
Tgfb1P04202 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tgfb1P04202 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfb1P04202 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfb1P04202 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.13■□□□□ 0.81
Tgfb1P04202 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfb1P04202 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfb1P04202 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfb1P04202 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfb1P04202 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.12■□□□□ 0.81
Tgfb1P04202 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfb1P04202 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
Tgfb1P04202 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tgfb1P04202 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfb1P04202 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfb1P04202 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tgfb1P04202 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tgfb1P04202 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tgfb1P04202 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfb1P04202 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfb1P04202 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.09■□□□□ 0.81
Tgfb1P04202 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfb1P04202 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfb1P04202 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Tgfb1P04202 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Tgfb1P04202 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfb1P04202 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfb1P04202 Gm27502-201ENSMUST00000183495 199 ntBASIC20.08■□□□□ 0.81
Tgfb1P04202 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfb1P04202 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfb1P04202 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfb1P04202 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfb1P04202 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfb1P04202 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.07■□□□□ 0.8
Tgfb1P04202 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tgfb1P04202 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfb1P04202 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfb1P04202 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tgfb1P04202 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.06■□□□□ 0.8
Tgfb1P04202 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tgfb1P04202 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfb1P04202 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfb1P04202 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfb1P04202 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfb1P04202 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.05■□□□□ 0.8
Tgfb1P04202 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfb1P04202 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.05■□□□□ 0.8
Tgfb1P04202 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfb1P04202 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfb1P04202 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfb1P04202 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.04■□□□□ 0.8
Tgfb1P04202 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfb1P04202 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfb1P04202 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfb1P04202 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfb1P04202 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tgfb1P04202 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
Tgfb1P04202 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms