Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CfdP03953 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CfdP03953 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CfdP03953 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CfdP03953 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CfdP03953 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CfdP03953 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CfdP03953 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CfdP03953 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CfdP03953 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CfdP03953 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CfdP03953 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CfdP03953 Nkain2-201ENSMUST00000092602 558 ntBASIC18.18■□□□□ 0.5
CfdP03953 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CfdP03953 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CfdP03953 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CfdP03953 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CfdP03953 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.17■□□□□ 0.5
CfdP03953 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CfdP03953 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CfdP03953 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CfdP03953 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CfdP03953 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.16■□□□□ 0.5
CfdP03953 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CfdP03953 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CfdP03953 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CfdP03953 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CfdP03953 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CfdP03953 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CfdP03953 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CfdP03953 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CfdP03953 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CfdP03953 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.14■□□□□ 0.49
CfdP03953 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CfdP03953 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CfdP03953 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CfdP03953 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CfdP03953 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CfdP03953 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CfdP03953 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CfdP03953 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CfdP03953 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CfdP03953 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CfdP03953 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.12■□□□□ 0.49
CfdP03953 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.12■□□□□ 0.49
CfdP03953 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CfdP03953 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CfdP03953 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CfdP03953 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CfdP03953 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.11■□□□□ 0.49
CfdP03953 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CfdP03953 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CfdP03953 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.11■□□□□ 0.49
CfdP03953 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CfdP03953 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CfdP03953 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.1■□□□□ 0.49
CfdP03953 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CfdP03953 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.1■□□□□ 0.49
CfdP03953 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CfdP03953 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CfdP03953 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CfdP03953 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CfdP03953 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CfdP03953 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CfdP03953 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CfdP03953 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CfdP03953 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.08■□□□□ 0.48
CfdP03953 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.08■□□□□ 0.48
CfdP03953 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CfdP03953 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.07■□□□□ 0.48
CfdP03953 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CfdP03953 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.06■□□□□ 0.48
CfdP03953 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
CfdP03953 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms