Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Matn4O89029 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Matn4O89029 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Matn4O89029 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Matn4O89029 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Matn4O89029 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Matn4O89029 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.62■□□□□ 0.89
Matn4O89029 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Matn4O89029 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Matn4O89029 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Matn4O89029 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Matn4O89029 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.62■□□□□ 0.89
Matn4O89029 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Matn4O89029 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.62■□□□□ 0.89
Matn4O89029 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Matn4O89029 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Matn4O89029 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Matn4O89029 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn4O89029 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.61■□□□□ 0.89
Matn4O89029 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.61■□□□□ 0.89
Matn4O89029 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn4O89029 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn4O89029 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Matn4O89029 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn4O89029 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Matn4O89029 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn4O89029 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Matn4O89029 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn4O89029 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn4O89029 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.6■□□□□ 0.89
Matn4O89029 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Matn4O89029 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Matn4O89029 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Matn4O89029 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Matn4O89029 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Matn4O89029 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Matn4O89029 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Matn4O89029 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Matn4O89029 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Matn4O89029 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Matn4O89029 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.58■□□□□ 0.88
Matn4O89029 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Matn4O89029 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.58■□□□□ 0.88
Matn4O89029 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.57■□□□□ 0.88
Matn4O89029 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Matn4O89029 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Matn4O89029 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.56■□□□□ 0.88
Matn4O89029 Gm7432-201ENSMUST00000210343 879 ntBASIC20.56■□□□□ 0.88
Matn4O89029 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Matn4O89029 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Matn4O89029 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.55■□□□□ 0.88
Matn4O89029 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Matn4O89029 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Matn4O89029 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.54■□□□□ 0.88
Matn4O89029 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Matn4O89029 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Matn4O89029 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Matn4O89029 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Matn4O89029 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn4O89029 Gm11599-201ENSMUST00000118720 878 ntBASIC20.53■□□□□ 0.88
Matn4O89029 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.53■□□□□ 0.88
Matn4O89029 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Matn4O89029 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn4O89029 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn4O89029 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.53■□□□□ 0.88
Matn4O89029 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Matn4O89029 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Matn4O89029 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Matn4O89029 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Matn4O89029 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Matn4O89029 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Matn4O89029 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Matn4O89029 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Matn4O89029 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.5■□□□□ 0.87
Matn4O89029 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Matn4O89029 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
Matn4O89029 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.5■□□□□ 0.87
Matn4O89029 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Matn4O89029 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Matn4O89029 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Matn4O89029 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.49■□□□□ 0.87
Matn4O89029 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Matn4O89029 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.49■□□□□ 0.87
Matn4O89029 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Matn4O89029 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Matn4O89029 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.49■□□□□ 0.87
Matn4O89029 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Matn4O89029 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Matn4O89029 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Matn4O89029 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Matn4O89029 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Matn4O89029 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Matn4O89029 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Matn4O89029 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Matn4O89029 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Matn4O89029 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Matn4O89029 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Matn4O89029 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Matn4O89029 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Matn4O89029 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms