Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx3O70137 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alx3O70137 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx3O70137 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.67■□□□□ 0.74
Alx3O70137 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx3O70137 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx3O70137 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alx3O70137 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Alx3O70137 Gm22567-201ENSMUST00000175542 342 ntBASIC19.66■□□□□ 0.74
Alx3O70137 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx3O70137 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx3O70137 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx3O70137 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Alx3O70137 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx3O70137 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Alx3O70137 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.64■□□□□ 0.73
Alx3O70137 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx3O70137 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx3O70137 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Alx3O70137 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.63■□□□□ 0.73
Alx3O70137 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx3O70137 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.63■□□□□ 0.73
Alx3O70137 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.63■□□□□ 0.73
Alx3O70137 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.63■□□□□ 0.73
Alx3O70137 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx3O70137 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Alx3O70137 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx3O70137 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.62■□□□□ 0.73
Alx3O70137 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx3O70137 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Alx3O70137 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx3O70137 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Alx3O70137 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Alx3O70137 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx3O70137 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx3O70137 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx3O70137 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx3O70137 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx3O70137 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.6■□□□□ 0.73
Alx3O70137 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx3O70137 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx3O70137 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.6■□□□□ 0.73
Alx3O70137 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Alx3O70137 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx3O70137 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.6■□□□□ 0.73
Alx3O70137 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx3O70137 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx3O70137 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.59■□□□□ 0.73
Alx3O70137 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Alx3O70137 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Alx3O70137 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx3O70137 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx3O70137 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx3O70137 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx3O70137 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx3O70137 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
Alx3O70137 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.58■□□□□ 0.72
Alx3O70137 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx3O70137 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Alx3O70137 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Alx3O70137 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx3O70137 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx3O70137 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx3O70137 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Alx3O70137 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx3O70137 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx3O70137 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx3O70137 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.57■□□□□ 0.72
Alx3O70137 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Alx3O70137 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx3O70137 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx3O70137 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx3O70137 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Alx3O70137 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Alx3O70137 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Alx3O70137 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.56■□□□□ 0.72
Alx3O70137 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Alx3O70137 Gm44428-201ENSMUST00000204474 874 ntBASIC19.56■□□□□ 0.72
Alx3O70137 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx3O70137 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx3O70137 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx3O70137 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx3O70137 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx3O70137 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.55■□□□□ 0.72
Alx3O70137 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.55■□□□□ 0.72
Alx3O70137 Gm6311-201ENSMUST00000073790 878 ntBASIC19.55■□□□□ 0.72
Alx3O70137 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx3O70137 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Alx3O70137 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alx3O70137 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx3O70137 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms