Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6bO35451 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6bO35451 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6bO35451 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Atf6bO35451 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6bO35451 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6bO35451 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6bO35451 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf6bO35451 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Atf6bO35451 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6bO35451 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.71■□□□□ 0.59
Atf6bO35451 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6bO35451 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6bO35451 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf6bO35451 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Atf6bO35451 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6bO35451 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Atf6bO35451 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6bO35451 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6bO35451 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.7■□□□□ 0.58
Atf6bO35451 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6bO35451 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6bO35451 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf6bO35451 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.7■□□□□ 0.58
Atf6bO35451 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Atf6bO35451 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6bO35451 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atf6bO35451 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6bO35451 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Atf6bO35451 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6bO35451 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6bO35451 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.68■□□□□ 0.58
Atf6bO35451 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf6bO35451 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6bO35451 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6bO35451 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.67■□□□□ 0.58
Atf6bO35451 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atf6bO35451 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6bO35451 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atf6bO35451 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Atf6bO35451 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atf6bO35451 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.67■□□□□ 0.58
Atf6bO35451 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Atf6bO35451 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Atf6bO35451 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf6bO35451 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Atf6bO35451 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atf6bO35451 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Atf6bO35451 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.65■□□□□ 0.58
Atf6bO35451 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6bO35451 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6bO35451 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Atf6bO35451 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf6bO35451 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf6bO35451 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf6bO35451 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6bO35451 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6bO35451 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.64■□□□□ 0.57
Atf6bO35451 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6bO35451 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6bO35451 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Atf6bO35451 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Atf6bO35451 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf6bO35451 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atf6bO35451 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6bO35451 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6bO35451 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.63■□□□□ 0.57
Atf6bO35451 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf6bO35451 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Atf6bO35451 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Atf6bO35451 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf6bO35451 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Atf6bO35451 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6bO35451 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.61■□□□□ 0.57
Atf6bO35451 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms