Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn20G5E8X0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn20G5E8X0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn20G5E8X0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.85■□□□□ 0.61
Cldn20G5E8X0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn20G5E8X0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.85■□□□□ 0.61
Cldn20G5E8X0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn20G5E8X0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn20G5E8X0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cldn20G5E8X0 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.84■□□□□ 0.61
Cldn20G5E8X0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn20G5E8X0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn20G5E8X0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn20G5E8X0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.84■□□□□ 0.61
Cldn20G5E8X0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn20G5E8X0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn20G5E8X0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn20G5E8X0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn20G5E8X0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn20G5E8X0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn20G5E8X0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn20G5E8X0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn20G5E8X0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn20G5E8X0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldn20G5E8X0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn20G5E8X0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cldn20G5E8X0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn20G5E8X0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn20G5E8X0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn20G5E8X0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn20G5E8X0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cldn20G5E8X0 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.8■□□□□ 0.6
Cldn20G5E8X0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cldn20G5E8X0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn20G5E8X0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.79■□□□□ 0.6
Cldn20G5E8X0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn20G5E8X0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn20G5E8X0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn20G5E8X0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn20G5E8X0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn20G5E8X0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn20G5E8X0 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.77■□□□□ 0.6
Cldn20G5E8X0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn20G5E8X0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn20G5E8X0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn20G5E8X0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn20G5E8X0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn20G5E8X0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn20G5E8X0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.76■□□□□ 0.59
Cldn20G5E8X0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.76■□□□□ 0.59
Cldn20G5E8X0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn20G5E8X0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn20G5E8X0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn20G5E8X0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cldn20G5E8X0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn20G5E8X0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn20G5E8X0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Cldn20G5E8X0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn20G5E8X0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn20G5E8X0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn20G5E8X0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn20G5E8X0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cldn20G5E8X0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn20G5E8X0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn20G5E8X0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cldn20G5E8X0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Cldn20G5E8X0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.72■□□□□ 0.59
Cldn20G5E8X0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn20G5E8X0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.71■□□□□ 0.59
Cldn20G5E8X0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cldn20G5E8X0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.71■□□□□ 0.59
Cldn20G5E8X0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn20G5E8X0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn20G5E8X0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn20G5E8X0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cldn20G5E8X0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn20G5E8X0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn20G5E8X0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn20G5E8X0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn20G5E8X0 Gm4799-201ENSMUST00000095396 657 ntBASIC18.7■□□□□ 0.58
Cldn20G5E8X0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cldn20G5E8X0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms