Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Herc1E9PZP8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc1E9PZP8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc1E9PZP8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.91□□□□□ -0.34
Herc1E9PZP8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc1E9PZP8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc1E9PZP8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Herc1E9PZP8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc1E9PZP8 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.91□□□□□ -0.34
Herc1E9PZP8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Herc1E9PZP8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Herc1E9PZP8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Herc1E9PZP8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Herc1E9PZP8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC12.89□□□□□ -0.35
Herc1E9PZP8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Herc1E9PZP8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Herc1E9PZP8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Herc1E9PZP8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Herc1E9PZP8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Herc1E9PZP8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Herc1E9PZP8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.88□□□□□ -0.35
Herc1E9PZP8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Mir7071-201ENSMUST00000184847 69 ntBASIC12.87□□□□□ -0.35
Herc1E9PZP8 Gm43017-201ENSMUST00000198296 752 ntBASIC12.87□□□□□ -0.35
Herc1E9PZP8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc1E9PZP8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Herc1E9PZP8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
Herc1E9PZP8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Herc1E9PZP8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Herc1E9PZP8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.85□□□□□ -0.35
Herc1E9PZP8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC12.85□□□□□ -0.35
Herc1E9PZP8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Herc1E9PZP8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc1E9PZP8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.84□□□□□ -0.35
Herc1E9PZP8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.35
Herc1E9PZP8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Herc1E9PZP8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Herc1E9PZP8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Herc1E9PZP8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Herc1E9PZP8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Herc1E9PZP8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Herc1E9PZP8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Herc1E9PZP8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Herc1E9PZP8 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.83□□□□□ -0.36
Herc1E9PZP8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Herc1E9PZP8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc1E9PZP8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms