Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5878E9PUB3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm5878E9PUB3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5878E9PUB3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5878E9PUB3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm5878E9PUB3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm5878E9PUB3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5878E9PUB3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5878E9PUB3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm5878E9PUB3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm5878E9PUB3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm5878E9PUB3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.34■□□□□ 0.21
Gm5878E9PUB3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm5878E9PUB3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5878E9PUB3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm5878E9PUB3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm5878E9PUB3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm5878E9PUB3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Gm5878E9PUB3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm5878E9PUB3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm5878E9PUB3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Gm5878E9PUB3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5878E9PUB3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5878E9PUB3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Gm5878E9PUB3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5878E9PUB3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5878E9PUB3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm5878E9PUB3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Gm6311-201ENSMUST00000073790 878 ntBASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gm5878E9PUB3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm5878E9PUB3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5878E9PUB3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm5878E9PUB3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Gm5878E9PUB3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm5878E9PUB3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm5878E9PUB3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5878E9PUB3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5878E9PUB3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5878E9PUB3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5878E9PUB3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm5878E9PUB3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm5878E9PUB3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm5878E9PUB3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm5878E9PUB3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm5878E9PUB3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm5878E9PUB3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm5878E9PUB3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms