Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm12887B1AVM1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm12887B1AVM1 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.59■□□□□ 0.41
Gm12887B1AVM1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm12887B1AVM1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm12887B1AVM1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Gm12887B1AVM1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Gm12887B1AVM1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm12887B1AVM1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm12887B1AVM1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm12887B1AVM1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.58■□□□□ 0.4
Gm12887B1AVM1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm12887B1AVM1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm12887B1AVM1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm12887B1AVM1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Gm12887B1AVM1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm12887B1AVM1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm12887B1AVM1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm12887B1AVM1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm12887B1AVM1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm12887B1AVM1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm12887B1AVM1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm12887B1AVM1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm12887B1AVM1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.54■□□□□ 0.4
Gm12887B1AVM1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Notumos-201ENSMUST00000151998 2659 ntBASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm12887B1AVM1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm12887B1AVM1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm12887B1AVM1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Gm12887B1AVM1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Gm12887B1AVM1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm12887B1AVM1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm12887B1AVM1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.52■□□□□ 0.39
Gm12887B1AVM1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm12887B1AVM1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm12887B1AVM1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm12887B1AVM1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.51■□□□□ 0.39
Gm12887B1AVM1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Gm12887B1AVM1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm12887B1AVM1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm12887B1AVM1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12887B1AVM1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12887B1AVM1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12887B1AVM1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm12887B1AVM1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm12887B1AVM1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm12887B1AVM1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm12887B1AVM1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Gm22567-201ENSMUST00000175542 342 ntBASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm12887B1AVM1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12887B1AVM1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm12887B1AVM1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm12887B1AVM1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gm12887B1AVM1 Nkain2-201ENSMUST00000092602 558 ntBASIC17.46■□□□□ 0.39
Gm12887B1AVM1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm12887B1AVM1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gm12887B1AVM1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm12887B1AVM1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms