Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21-psA0A140T8R2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21-psA0A140T8R2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.34■□□□□ 0.37
Vma21-psA0A140T8R2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21-psA0A140T8R2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vma21-psA0A140T8R2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vma21-psA0A140T8R2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Vma21-psA0A140T8R2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21-psA0A140T8R2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Vma21-psA0A140T8R2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21-psA0A140T8R2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vma21-psA0A140T8R2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21-psA0A140T8R2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21-psA0A140T8R2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Vma21-psA0A140T8R2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21-psA0A140T8R2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vma21-psA0A140T8R2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21-psA0A140T8R2 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.28■□□□□ 0.36
Vma21-psA0A140T8R2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21-psA0A140T8R2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21-psA0A140T8R2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21-psA0A140T8R2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21-psA0A140T8R2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Gm6311-201ENSMUST00000073790 878 ntBASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.27■□□□□ 0.36
Vma21-psA0A140T8R2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vma21-psA0A140T8R2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Vma21-psA0A140T8R2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21-psA0A140T8R2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21-psA0A140T8R2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21-psA0A140T8R2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21-psA0A140T8R2 Gm22567-201ENSMUST00000175542 342 ntBASIC17.26■□□□□ 0.35
Vma21-psA0A140T8R2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21-psA0A140T8R2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vma21-psA0A140T8R2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.24■□□□□ 0.35
Vma21-psA0A140T8R2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.24■□□□□ 0.35
Vma21-psA0A140T8R2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.24■□□□□ 0.35
Vma21-psA0A140T8R2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21-psA0A140T8R2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21-psA0A140T8R2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21-psA0A140T8R2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.22■□□□□ 0.35
Vma21-psA0A140T8R2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21-psA0A140T8R2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21-psA0A140T8R2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21-psA0A140T8R2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vma21-psA0A140T8R2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms