Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trbv29A0A0G2LB96 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv29A0A0G2LB96 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trbv29A0A0G2LB96 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv29A0A0G2LB96 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv29A0A0G2LB96 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv29A0A0G2LB96 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.07■□□□□ 0.48
Trbv29A0A0G2LB96 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv29A0A0G2LB96 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv29A0A0G2LB96 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.06■□□□□ 0.48
Trbv29A0A0G2LB96 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.06■□□□□ 0.48
Trbv29A0A0G2LB96 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trbv29A0A0G2LB96 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv29A0A0G2LB96 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv29A0A0G2LB96 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.04■□□□□ 0.48
Trbv29A0A0G2LB96 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv29A0A0G2LB96 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv29A0A0G2LB96 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv29A0A0G2LB96 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv29A0A0G2LB96 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv29A0A0G2LB96 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trbv29A0A0G2LB96 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv29A0A0G2LB96 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.03■□□□□ 0.48
Trbv29A0A0G2LB96 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv29A0A0G2LB96 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv29A0A0G2LB96 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv29A0A0G2LB96 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv29A0A0G2LB96 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv29A0A0G2LB96 Gm7432-201ENSMUST00000210343 879 ntBASIC18.02■□□□□ 0.48
Trbv29A0A0G2LB96 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trbv29A0A0G2LB96 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trbv29A0A0G2LB96 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv29A0A0G2LB96 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.02■□□□□ 0.47
Trbv29A0A0G2LB96 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv29A0A0G2LB96 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv29A0A0G2LB96 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv29A0A0G2LB96 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv29A0A0G2LB96 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trbv29A0A0G2LB96 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Gm11599-201ENSMUST00000118720 878 ntBASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv29A0A0G2LB96 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv29A0A0G2LB96 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trbv29A0A0G2LB96 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms