Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv30A0A0B4J1P1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv30A0A0B4J1P1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv30A0A0B4J1P1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv30A0A0B4J1P1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv30A0A0B4J1P1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv30A0A0B4J1P1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.31■□□□□ 0.2
Trbv30A0A0B4J1P1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv30A0A0B4J1P1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv30A0A0B4J1P1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv30A0A0B4J1P1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv30A0A0B4J1P1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv30A0A0B4J1P1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv30A0A0B4J1P1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv30A0A0B4J1P1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv30A0A0B4J1P1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv30A0A0B4J1P1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv30A0A0B4J1P1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv30A0A0B4J1P1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv30A0A0B4J1P1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv30A0A0B4J1P1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Gm22567-201ENSMUST00000175542 342 ntBASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv30A0A0B4J1P1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms