Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.77■□□□□ 0.11
Trbv16A0A0B4J1H3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv16A0A0B4J1H3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv16A0A0B4J1H3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv16A0A0B4J1H3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv16A0A0B4J1H3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv16A0A0B4J1H3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv16A0A0B4J1H3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv16A0A0B4J1H3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv16A0A0B4J1H3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Gm7432-201ENSMUST00000210343 879 ntBASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv16A0A0B4J1H3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv16A0A0B4J1H3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv16A0A0B4J1H3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv16A0A0B4J1H3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv16A0A0B4J1H3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv16A0A0B4J1H3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv16A0A0B4J1H3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv16A0A0B4J1H3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv16A0A0B4J1H3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv16A0A0B4J1H3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv16A0A0B4J1H3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Gm11599-201ENSMUST00000118720 878 ntBASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv16A0A0B4J1H3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv16A0A0B4J1H3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv16A0A0B4J1H3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv16A0A0B4J1H3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv16A0A0B4J1H3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv16A0A0B4J1H3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trbv16A0A0B4J1H3 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.66■□□□□ 0.1
Trbv16A0A0B4J1H3 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.66■□□□□ 0.1
Trbv16A0A0B4J1H3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv16A0A0B4J1H3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms