Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.32■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm12366-201ENSMUST00000121722 873 ntBASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm5786-201ENSMUST00000085368 882 ntBASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-12A0A0A6YXJ9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.27■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-12A0A0A6YXJ9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms