Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav6-4A0A075B6B4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-4A0A075B6B4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-4A0A075B6B4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-4A0A075B6B4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Gm10420-201ENSMUST00000121713 882 ntBASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-4A0A075B6B4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-4A0A075B6B4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-4A0A075B6B4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-4A0A075B6B4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-4A0A075B6B4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav6-4A0A075B6B4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-4A0A075B6B4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Gm22567-201ENSMUST00000175542 342 ntBASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-4A0A075B6B4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-4A0A075B6B4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-4A0A075B6B4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Trav6-4A0A075B6B4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-4A0A075B6B4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-4A0A075B6B4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-4A0A075B6B4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms