Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9n-4A0A075B631 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav9n-4A0A075B631 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9n-4A0A075B631 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.82□□□□□ -0.04
Trav9n-4A0A075B631 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9n-4A0A075B631 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav9n-4A0A075B631 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9n-4A0A075B631 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9n-4A0A075B631 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9n-4A0A075B631 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9n-4A0A075B631 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9n-4A0A075B631 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trav9n-4A0A075B631 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9n-4A0A075B631 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9n-4A0A075B631 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9n-4A0A075B631 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9n-4A0A075B631 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9n-4A0A075B631 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9n-4A0A075B631 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9n-4A0A075B631 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav9n-4A0A075B631 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.76□□□□□ -0.05
Trav9n-4A0A075B631 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9n-4A0A075B631 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9n-4A0A075B631 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9n-4A0A075B631 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Gm6311-201ENSMUST00000073790 878 ntBASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-4A0A075B631 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-4A0A075B631 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-4A0A075B631 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms